BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C10SP1|AL428702
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1395 1722 0.0
>3x_Contig1395
Length = 6688
Score = 1722 bits (862), Expect = 0.0
Identities = 872/882 (98%)
Strand = Plus / Minus
Query: 1 atcttaaacgagaggtatggttttataatattattggaccaagaattgaaagctaatagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 atcttaaacgagaggtatggttttataatattattggaccaagaattgaaagctaatagc 1116
Query: 61 ttgatacatgtatagatgtctgatgcgaagagtaccacttttaaaattgttaagccccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 ttgatacatgtatagatgtctgatgcgaagagtaccacttttaaaattgttaagccccaa 1056
Query: 121 aagatgaacacataactcaccacagttttgaatctatagttcttgaacagctcgagatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 aagatgaacacataactcaccacagttttgaatctatagttcttgaacagctcgagatca 996
Query: 181 agcacatcaaaggtcttagagttaagatccaactttctatcattatcaaacatattagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 agcacatcaaaggtcttagagttaagatccaactttctatcattatcaaacatattagaa 936
Query: 241 gagggaatgcactcaggttattcgactaaacagatcagtctttgcaagtatctataaatm 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 gagggaatgcactcaggttattcgactaaacagatcagtctttgcaagtatctataaata 876
Query: 301 atctcaaagtgaatcatataccatagataaaacaaaaagatactgattgggagctccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 atctcaaagtgaatcatataccatagataaaacaaaaagatactgattgggagctccaaa 816
Query: 361 attgattctgatatgggatacaatgataccaccaatataatgtctcttaagtaccaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 attgattctgatatgggatacaatgataccaccaatataatgtctcttaagtaccaaata 756
Query: 421 gactattctaaacctccaactgttgttatttactttcgtgtttcatcttaaaactaatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gactattctaaacctccaactgttgttatttactttcgtgtttcatcttaaaactaatgt 696
Query: 481 tgttatataaggmaatgttgatttcctataammmgattctttgaccgtgatctataatcg 540
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 695 tgttatataaggaaatgttgatttcctataaaaagattctttgaccgtgatctataatcg 636
Query: 541 aattctgaacaaaaaccgatggttttaaagggactatattamggmaatcagtgccgaata 600
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 635 aattctgaacaaaaaccgatggttttaaagggactatattaaggaaatcagtgccgaata 576
Query: 601 tgtagtgcgataggctttgtaacatagaatgacctagatgttatgttagagagattattc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tgtagtgcgataggctttgtaacatagaatgacctagatgttatgttagagagattattc 516
Query: 661 cgttctatcataamasatgattttttatatgtmtagttattgtctctgaataaattaaat 720
||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 515 cgttctatcataaaagatgattttttatatgtatagttattgtctctgaataaattaaat 456
Query: 721 gctatagtaggtgacacatgtcaggacactgattcagaatcagttacgcgctgatgagat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gctatagtaggtgacacatgtcaggacactgattcagaatcagttacgcgctgatgagat 396
Query: 781 aaccatattcctgatttcgtacatgtatgatttgtcatttaaactggtatgtgactggtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaccatattcctgatttcgtacatgtatgatttgtcatttaaactggtatgtgactggtc 336
Query: 841 tgcggaaccagtgtctctagatttatcaccaagaatgaacca 882
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgcggaaccagtgtctctagatttatcaccaagaatgaacca 294
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6241
Number of Sequences: 1807
Number of extensions: 6241
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)